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Results for RNA-seq

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Sara E. Pinney, MD, MS
Sara E. Pinney

Dr. Pinney investigates the molecular mechanisms that link an adverse intrauterine milieu to the development of diabetes and obesity later in life. Specifically, she is researching how intrauterine growth restriction, gestational diabetes and in utero exposure to environmental toxicants contribute to the development of diabetes and obesity in offspring.

E-mail:
pinneys [at] chop.edu
Kai Tan, PhD
Kai Tan

Dr. Tan studies transcriptional regulation during normal development and disease. This involves the interplay of multiple transcription and epigenetic factors in a 3D chromosomal environment. Using experimental genomics and computational modeling, Dr. Tan investigates transcriptional regulatory networks underlying embryonic hematopoiesis, T cell differentiation, and pediatric leukemia.

E-mail:
tank1 [at] chop.edu
Kathleen E. Sullivan, MD, PhD
Photo of Kathleen E. Sullivan

Dr. Sullivan's research focuses on new and rare immunodeficiencies. She has a long-standing interest in one of the most common of the primary immunodeficiencies – chromosome 22q11.2 deletion syndrome. She also investigates common variable immunodeficiency, as well as the genetics and epigenetics of systemic lupus erythematosus.

E-mail:
sullivank [at] chop.edu
Kathrin M. Bernt, MD
Kathrin M. Bernt

As a physician-scientist, Dr. Bernt's goal is to further the understanding of the role of transcriptional regulation in pediatric hematopoietic stem cell biology and leukemia, and translate findings into novel therapies.

E-mail:
berntk [at] chop.edu

Snapshot Science: How Did Researchers Resolve Adverse Symptoms that Emerged with AAV-based RNA Interference Strategies for Ataxia Therapy?

Published on
Oct 18, 2021
in Cornerstone Blog
Researchers Resolve Symptoms that Emerged with AAV-based RNAi for SCA1
Raymond G. Perelman Center for Cellular and Molecular Therapeutics team highlights that extended safety testing of AAV-based RNAi strategies is critical.

Researchers Develop Long-read-based Strategy for circRNA Analysis

Published on
Jan 15, 2021
in Cornerstone Blog
Researchers Develop Long-read-based Strategy for circRNA Analysis
Researchers eager to understand circRNAs’ unique set of properties and their functional roles.

Novel Approaches to Data Analysis Lead to Discovery at SAGES

Published on
Jun 18, 2019
in Cornerstone Blog
Marcella Devoto
The Symposium on Advances in Genomic, Epidemiology, and Statistics shares analytical methods for genomics and other high-dimensional data research fields.

2019 Scientific Symposium Sparks Discussions on Big Data

Published on
May 29, 2019
in Cornerstone Blog
2019 Scientific Symposium
The 2019 Scientific Symposium focused on the advances CHOP researchers have made in the booming area of genomics and data science.

Snapshot Science: How Does a New Computational Method Transform Public Big Data Into Knowledge of Transcript Splicing?

Published on
Mar 26, 2019
in Cornerstone Blog
Yi Xing
A new deep-learning model predicts the behavior of splicing regulation, helping researchers to increase their experiments’ efficiency.

New Computational Tool Harnesses Big Data and Deep Learning to Illuminate Dark Matter of the Transcriptome

Published on
Mar 26, 2019
in Press Releases
A research team at Children’s Hospital of Philadelphia (CHOP) has developed an innovative computational tool offering researchers an efficient method for detecting the different ways RNA is pieced together (spliced) when copied from DNA.
1 - 10 of 21

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In this section

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  • Principal Investigator / Faculty (4)

Organizations

  • Center for Computational and Genomic Medicine (5)
  • Center for Single Cell Biology (2)
  • Department of Biomedical and Health Informatics (2)
  • Grant Laboratory (2)
  • Raymond G. Perelman Center for Cellular and Molecular Therapeutics (2)
  • Spatial and Functional Genomics Research Affinity Group (2)
  • Wells Laboratory (2)
  • Blobel Laboratory (1)
  • Center for Applied Genomics (1)
  • Center for Data-Driven Discovery in Biomedicine (1)
  • Center for Mitochondrial and Epigenomic Medicine (1)
  • Center for Spatial and Functional Genomics (1)
  • Department of Pediatrics (1)
  • Division of Allergy and Immunology (1)
  • Division of Gastroenterology, Hepatology, and Nutrition (1)
  • High Throughput Sequencing Core (1)
  • Roberts Individualized Medical Genetics Center (1)

In this section

Filter By

  • Principal Investigator / Faculty (4)

Organizations

  • Center for Computational and Genomic Medicine (5)
  • Center for Single Cell Biology (2)
  • Department of Biomedical and Health Informatics (2)
  • Grant Laboratory (2)
  • Raymond G. Perelman Center for Cellular and Molecular Therapeutics (2)
  • Spatial and Functional Genomics Research Affinity Group (2)
  • Wells Laboratory (2)
  • Blobel Laboratory (1)
  • Center for Applied Genomics (1)
  • Center for Data-Driven Discovery in Biomedicine (1)
  • Center for Mitochondrial and Epigenomic Medicine (1)
  • Center for Spatial and Functional Genomics (1)
  • Department of Pediatrics (1)
  • Division of Allergy and Immunology (1)
  • Division of Gastroenterology, Hepatology, and Nutrition (1)
  • High Throughput Sequencing Core (1)
  • Roberts Individualized Medical Genetics Center (1)
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