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Results for Computational Modeling

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Kai Tan, PhD
Kai Tan

Dr. Tan studies transcriptional regulation during normal development and disease. This involves the interplay of multiple transcription and epigenetic factors in a 3D chromosomal environment. Using experimental genomics and computational modeling, Dr. Tan investigates transcriptional regulatory networks underlying embryonic hematopoiesis, T cell differentiation, and pediatric leukemia.

E-mail:
tank1 [at] chop.edu
Matthew A. Jolley, MD
Matthew A. Jolley, MD

Dr. Jolley's research lab is focused on visualizing and quantifying congenitally abnormal heart structures using 3D imaging with the driving goal of informing surgical and interventional planning in children and adults with congenital heart disease.

E-mail:
jolleym [at] chop.edu
Nikolaos G. Sgourakis, PhD
Nikolaos G. Sgourakis

Dr. Sgourakis’ research focuses on understanding the intricate molecular mechanisms that determine the vast repertoire of peptide antigens displayed by the proteins of the Major Histocompatibility Complex for immune surveillance by T cells and Natural Killer cells.

E-mail:
sgourakisn [at] chop.edu
Aaron Alexander-Bloch, MD, PhD
Aaron Alexander-Bloch, MD, PhD

Dr. Alexander-Bloch investigates normal brain development and the altered developmental trajectories that lead to mental illness. His multi-disciplinary research integrates brain imaging, genomics and clinical information.

E-mail:
alexanderba [at] chop.edu
Jarcy Zee, PhD
Jarcy Zee

Dr. Zee's statistical methods research includes topics in survival analysis, measurement error, observational data methods, and machine learning. Her clinical research is focused on kidney disease, specifically in clinical and pathology markers of glomerular and chronic kidney disease progression.

E-mail:
zeej [at] chop.edu
Allan F. Simpao, MD, MBI
Allan F. Simpao

Dr. Simpao, a pediatric anesthesiologist and clinical informatician, has a strong track record of innovation and research. He's led projects that use visual analytics and machine learning models to derive insights and predict outcomes using large healthcare data sets.

E-mail:
simpaoa [at] chop.edu
Fuchiang (Rich) Tsui, PhD, FAMIA
Fuchiang (Rich) Tsui

Dr. Tsui's research interests include clinical informatics, natural language processing, artificial intelligence and machine learning, population informatics, data science, signal processing, mobile healthcare, and large real-time clinical production systems. He's published over 100 peer-reviewed papers.

E-mail:
tsuif [at] chop.edu
Janet R. Reid, MD, FRCPC
Janet R. Reid

Dr. Reid's main project is RADIAL, an adaptive learning education platform that houses filtered knowledge around all subspecialties and delivers a customized curriculum to the end-user using deep learning algorithms.

E-mail:
reidj [at] chop.edu
Justine Shults, PhD, MS
Justine Shults

Dr. Shults works to develop statistical methods for longitudinal data that include semi-parametric approaches to account for subject/cluster level associations and maximum likelihood-based approaches for simulation and analysis of discrete longitudinal outcomes that may have overdispersion.

E-mail:
shultsj [at] chop.edu
Dah-Jyuu Wang, PhD
Dah-Jyuu Wang

Dr. Wang works on biomarker identification using multiparametric magnetic resonance imaging and homo- and hetero-nuclear spectroscopy techniques for pediatric disease research including  tumors, iron overload, cystic fibrosis, muscular dystrophy, autism, mitochondrial, Gaucher’s, and Canavan’s diseases.

E-mail:
wangd [at] chop.edu
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In this section

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  • Principal Investigator / Faculty (10)
  • Researcher / Lab Personnel (1)

Organizations

  • Department of Biomedical and Health Informatics (13)
  • Center for Injury Research and Prevention (11)
  • Department of Pediatrics (11)
  • Department of Pathology and Laboratory Medicine (10)
  • Center for Autism Research (9)
  • Division of Oncology (9)
  • Center for Computational and Genomic Medicine (8)
  • Center for Applied Genomics (7)
  • Center for Childhood Cancer Research (7)
  • Department of Anesthesiology and Critical Care Medicine (7)
  • Raymond G. Perelman Center for Cellular and Molecular Therapeutics (6)
  • Clinical Futures (4)
  • Division of Allergy and Immunology (4)
  • Jolley Laboratory (4)
  • Center for Data-Driven Discovery in Biomedicine (3)
  • Division of Cardiology (3)
  • Division of Human Genetics (3)
  • Division of Infectious Diseases (3)
  • Division of Nephrology (3)
  • Lifespan Brain Institute (3)
  • Brain-Gene-Development Lab (2)
  • Center for Mitochondrial and Epigenomic Medicine (2)
  • CHOP Cardiovascular Institute (2)
  • Department of Child and Adolescent Psychiatry and Behavioral Sciences (2)
  • Department of Radiology (2)
  • Department of Surgery (2)
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  • Division of Hematology (2)
  • Division of Neonatology (2)
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  • Institutional Review Board (2)
  • Lurie Family Foundations MEG Imaging Center (2)
  • Minds Matter Concussion Program (2)
  • Mir Laboratory (2)
  • Penn-CHOP Kidney Innovation Center (2)
  • PolicyLab (2)
  • Research Information Services (2)
  • RIS End User Technology Services (2)
  • The Resuscitation Science Center (2)
  • Anderson Laboratory (1)
  • Center for Child Injury Prevention Studies (1)
  • Center for Pediatric Heart Valve Disorders (1)
  • Center for Spatial and Functional Genomics (1)
  • Center for Violence Prevention (1)
  • Children’s Oncology Group (1)
  • Computational Epigenetics (1)
  • Congenital Hyperinsulinism Research Laboratory (1)
  • Division of Adolescent Medicine (1)
  • Division of Endocrinology and Diabetes (1)
  • Division of Gastroenterology, Hepatology, and Nutrition (1)
  • Division of Neurosurgery (1)
  • Division of Orthopaedic Surgery (1)
  • Division of Plastic, Reconstructive and Oral Surgery (1)
  • Division of Protective Immunity (1)
  • Division of Pulmonary and Sleep Medicine (1)
  • Division of Rheumatology (1)
  • Epilepsy NeuroGenetics Initiative (ENGIN) (1)
  • Genes, Genomics, and Pediatric Disease Affinity Group (1)
  • Immune Dysregulation Program (1)
  • Innovation Ecosystem (1)
  • Intellectual and Developmental Disabilities Research Center (1)
  • Leukodystrophy Center of Excellence (1)
  • Mitchell Laboratory (1)
  • Office of Academic Training and Outreach Programs (1)
  • Office of the Ruth M. Colket Chair Pediatric Nursing Science (1)
  • Pediatric Center of Excellence in Nephrology (1)
  • PEDSnet (1)
  • Roberts Individualized Medical Genetics Center (1)
  • Romberg Laboratory (1)
  • Sleep Center (1)
  • Tan Laboratory (1)
  • Tasian Laboratory (1)
  • Thomas-Tikhonenko Laboratory (1)
  • Tsui Laboratory (1)
  • Xing Laboratory (1)

In this section

Filter By

  • Principal Investigator / Faculty (10)
  • Researcher / Lab Personnel (1)

Organizations

  • Department of Biomedical and Health Informatics (13)
  • Center for Injury Research and Prevention (11)
  • Department of Pediatrics (11)
  • Department of Pathology and Laboratory Medicine (10)
  • Center for Autism Research (9)
  • Division of Oncology (9)
  • Center for Computational and Genomic Medicine (8)
  • Center for Applied Genomics (7)
  • Center for Childhood Cancer Research (7)
  • Department of Anesthesiology and Critical Care Medicine (7)
  • Raymond G. Perelman Center for Cellular and Molecular Therapeutics (6)
  • Clinical Futures (4)
  • Division of Allergy and Immunology (4)
  • Jolley Laboratory (4)
  • Center for Data-Driven Discovery in Biomedicine (3)
  • Division of Cardiology (3)
  • Division of Human Genetics (3)
  • Division of Infectious Diseases (3)
  • Division of Nephrology (3)
  • Lifespan Brain Institute (3)
  • Brain-Gene-Development Lab (2)
  • Center for Mitochondrial and Epigenomic Medicine (2)
  • CHOP Cardiovascular Institute (2)
  • Department of Child and Adolescent Psychiatry and Behavioral Sciences (2)
  • Department of Radiology (2)
  • Department of Surgery (2)
  • Division of Cancer Pathobiology (2)
  • Division of Emergency Medicine (2)
  • Division of Hematology (2)
  • Division of Neonatology (2)
  • Division of Neurology (2)
  • Institutional Review Board (2)
  • Lurie Family Foundations MEG Imaging Center (2)
  • Minds Matter Concussion Program (2)
  • Mir Laboratory (2)
  • Penn-CHOP Kidney Innovation Center (2)
  • PolicyLab (2)
  • Research Information Services (2)
  • RIS End User Technology Services (2)
  • The Resuscitation Science Center (2)
  • Anderson Laboratory (1)
  • Center for Child Injury Prevention Studies (1)
  • Center for Pediatric Heart Valve Disorders (1)
  • Center for Spatial and Functional Genomics (1)
  • Center for Violence Prevention (1)
  • Children’s Oncology Group (1)
  • Computational Epigenetics (1)
  • Congenital Hyperinsulinism Research Laboratory (1)
  • Division of Adolescent Medicine (1)
  • Division of Endocrinology and Diabetes (1)
  • Division of Gastroenterology, Hepatology, and Nutrition (1)
  • Division of Neurosurgery (1)
  • Division of Orthopaedic Surgery (1)
  • Division of Plastic, Reconstructive and Oral Surgery (1)
  • Division of Protective Immunity (1)
  • Division of Pulmonary and Sleep Medicine (1)
  • Division of Rheumatology (1)
  • Epilepsy NeuroGenetics Initiative (ENGIN) (1)
  • Genes, Genomics, and Pediatric Disease Affinity Group (1)
  • Immune Dysregulation Program (1)
  • Innovation Ecosystem (1)
  • Intellectual and Developmental Disabilities Research Center (1)
  • Leukodystrophy Center of Excellence (1)
  • Mitchell Laboratory (1)
  • Office of Academic Training and Outreach Programs (1)
  • Office of the Ruth M. Colket Chair Pediatric Nursing Science (1)
  • Pediatric Center of Excellence in Nephrology (1)
  • PEDSnet (1)
  • Roberts Individualized Medical Genetics Center (1)
  • Romberg Laboratory (1)
  • Sleep Center (1)
  • Tan Laboratory (1)
  • Tasian Laboratory (1)
  • Thomas-Tikhonenko Laboratory (1)
  • Tsui Laboratory (1)
  • Xing Laboratory (1)
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